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- 3Agricultural, Food and Nutritional Science, Department of/Journal Articles (Agricultural, Food and Nutritional Science)
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- 2Graduate and Postdoctoral Studies (GPS), Faculty of/Theses and Dissertations
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A first generation whole genome RH map of the river buffalo with comparison to domestic cattle
Download2008
Santana, Andre M., Tonhati, Humberto, Greco, Anthony J., Mishra, Bina, Cai, Zhipeng, Kumar, S. T. Bharani, Tantia, Madhu S., Jones, Brittany C., Saradhi, G. Pardha, Miziara, Melissa N., Kumar, M. Aravind, Kochan, Kelli J., Goldammer, Tom, Brunner, Ronald M., Caetano, Alexandre R., Weikard, Rosemarie, Womack, James E., Mathew, Boby, Kumar, Satish, Pelai, Vanderlei A., Filho, Edson A. R., Jeong, Jooha, Prasad, Aparna, Vijh, Ramesh K., Lin, Guohui, Moore, Stephen, Galvao, Stephan R., Mariani, Paola, Grant, Jason R., Stafuzza, Nedenia B., Fornitano, Larissa C., Riggs, Penny K., Stothard, Paul, Amaral, M. Elisabete
Background The recently constructed river buffalo whole-genome radiation hybrid panel (BBURH5000) has already been used to generate preliminary radiation hybrid (RH) maps for several chromosomes, and buffalo-bovine comparative chromosome maps have been constructed. Here, we present the...
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2008
Cai, Zhipeng, Lin, Guohui, Want, Lusheng, Chen, Zhi-Zhong
Technical report TR08-06. The Capacitated Multicast Tree Routing Problem is considered, in which only a limited number of destination nodes are allowed to receive data in one routing tree and multiple routing trees are needed to send data from the source node to all destination nodes. The goal...
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2011
Goebel, Randy, Wang, Lusheng, Lin, Guohui, Li, Zhong
Technical report TR11-02. Given two genomic maps G1 and G2 each represented as a sequence of n gene markers, the maximal strip recovery (MSR) problem is to retain the maximum number of markers in both G1 and G2 such that the resultant subsequences, denoted as G1* and G2*, can be partitioned into...
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2012
Wang, Lusheng, Moore, Steve S., Cai, Zhipeng, Goebel, Randy, Lin, Guohui, Wang, Yining, Stothard, Paul
Background Single nucleotide polymorphism (SNP) genotyping assays normally give rise to certain percents of no-calls; the problem becomes severe when the target organisms, such as cattle, do not have a high resolution genomic sequence. Missing SNP genotypes, when related to target traits, would...
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Genome-wide association and genomic prediction of breeding values for fatty acid composition in subcutaneous adipose and longissimus lumborum muscle of beef cattle
Download2015
Ekine-Dzivenu, Chinyere, Basarab, John A., Li, Changxi, Chen, Liuhong, Vinsky, Michael D., Aalhus, Jennifer L., Fitzsimmons, Carolyn J., Stothard, Paul, Dugan, Mike E. R.
Background Identification of genetic variants that are associated with fatty acid composition in beef will enhance our understanding of host genetic influence on the trait and also allow for more effective improvement of beef fatty acid profiles through genomic selection and marker-assisted diet...
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2004
Cai, Zhipeng, Lin, Guohui, Xue, Guoliang
Technical report TR04-12. For the Capacitated Multicast Routing Problem, we considered two models which are the Multicast k-Path Routing and the Multicast k-Tree Routing. We presented two improved approximation algorithms for them, which have worst case performance ratios of 3 and (2 + ρ) (ρ is...