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Skip to Search Results- 11Graduate and Postdoctoral Studies (GPS), Faculty of
- 11Graduate and Postdoctoral Studies (GPS), Faculty of/Theses and Dissertations
- 7Biological Sciences, Department of
- 7Biological Sciences, Department of/Journal Articles (Biological Sciences)
- 2Agricultural, Food and Nutritional Science, Department of
- 2Agricultural, Food and Nutritional Science, Department of/Journal Articles (Agricultural, Food and Nutritional Science)
- 2Shaw, John M. (Chemical and Materials Engineering)
- 1Dick, Scott (Department of Electrical and Computer Engineering)
- 1Flannigan, Mike (Renewable Resources)
- 1Greiner, Russell (Computing Science)
- 1Koch, Charles Robert (Mechanical Engineering)
- 1Kurgan, Lukasz (Department of Electrical and Computer Engineering)
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Computational support systems for prediction and characterization of protein crystallization outcomes
DownloadFall 2013
Analysis of protein structures may reveal their function, regulation and interactions. Almost 90% of the known protein structures were solved using X-ray crystallography; however, many more structures remain unsolved. Protein Structure Initiative (PSI) project was created to speed up structure...
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CS23D: A web server for rapid protein structure generation using NMR chemical shifts and sequence data
Download2008
Wishart, D.S., Berjanskii, M., Arndt, D., Lin, G., Tang, P., Zhou, J.
CS23D (chemical shift to 3D structure) is a web server for rapidly generating accurate 3D protein structures using only assigned nuclear magnetic resonance (NMR) chemical shifts and sequence data as input. Unlike conventional NMR methods, CS23D requires no NOE and/or J-coupling data to perform...
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2006
Berlyn, M.K., Plunkett, G., Wishart, D.S., Nori, H., Riley, M., Rudd, K.E., Glasner, J.D., Arnaud, M.B., Abe, T., Thomson, N.R., Wanner, B.L., Pernas, N.T., Blattner, F.R., Serres, M.H., Thomas, G.H., Horiuchi, T., Kosuge, T., Keseler, I.M., Chaudhuri, R.R.
The goal of this group project has been to coordinate and bring up-to-date information on all genes of Escherichia coli K-12. Annotation of the genome of an organism entails identification of genes, the boundaries of genes in terms of precise start and end sites, and description of the gene...
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Spring 2012
Homogenous Charge Compression Ignition (HCCI) is a promising technology that offers high fuel economy and low oxides of nitrogen and particulate emission for automotive and stationary engines. A significant challenge with HCCI is the large number of partial burn/misfire cycles within the lean...
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Fall 2016
Humans are the major cause of forest fires in the spring in Alberta, and have resulted in major property damage in both the Flat Top Complex fires in 2011 and the Fort McMurray fire in 2016. Fire occurrence prediction (FOP) models can help predict when and where fires can be expected in order to...
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2009
Bassett, E., Wishart, D.S., Lu, P., MacDonnell, C., Berjanskii, M., Zhou, J., Liang, J., Zhou, Y., Cruz, J.A., Lin, G., Tang, P.
GeNMR (GEnerate NMR structures) is a web server for rapidly generating accurate 3D protein structures using sequence data, NOE-based distance restraints and/or NMR chemical shifts as input. GeNMR accepts distance restraints in XPLOR or CYANA format as well as chemical shift files in either SHIFTY...
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2007
Wang, W., Wang, H., Wong, G.K.S., Zheng, H., Clark, T., Zhang, G., Kang, L., Wang, J., Shi, J., Wang, X.
Background Insects constitute the vast majority of known species with their importance including biodiversity, agricultural, and human health concerns. It is likely that the successful adaptation of the Insecta clade depends on specific components in its proteome that give rise to specialized...
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Impacts of Recovery Rates and Terms of Trade on Strange Attractors and Predictability in Sustainable Agriculture
Download1994
Schilizzi, Steven, Apedaile, L. Peter, Freedman, H.I., Solomonovich, M.
Sustaining agricultural systems requires the ability to predict approaching extinction. Thus a suitable model needs to generate predictability as an intrinsic attribute. Such a model should provide several features for managers. It should incorporate learning about the minimum sustainable...
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Implementation and Evaluation of Spatiotemporal Prediction Algorithms and Prediction of Spatially Distributed Greenhouse Gas Inventories
DownloadFall 2011
Growing environmental concerns require monitoring and modelling of greenhouse gases. These modelling efforts require processing of massive datasets in a timely fashion. This, in turn, can lead to feasibility problems when estimating values of missing data points. This thesis examines and compares...
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Fall 2011
Proteins, which participate in virtually every process within cells, implement many of their functions through interactions with various ligands. Although a substantial effort in characterization and prediction of protein-ligand interactions was observed in the past two decades, these subjects...