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Skip to Search Results- 17Graduate and Postdoctoral Studies (GPS), Faculty of
- 17Graduate and Postdoctoral Studies (GPS), Faculty of/Theses and Dissertations
- 5Computing Science, Department of
- 5Computing Science, Department of/Technical Reports (Computing Science)
- 2Biological Sciences, Department of
- 2Biological Sciences, Department of/Journal Articles (Biological Sciences)
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2003
Greiner, Russell, Wishart, David, Eisner, Roman, Lu, Z., Lu, Paul, Macdonell, Cam, Poulin, B., Szafron, Duane, Anvik, J.
Technical report TR03-14. Identifying the destination or localization of proteins is key to understanding their function and facilitating their purification. A number of existing computational prediction methods are based on sequence analysis. However, these methods are limited in scope, accuracy...
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Fall 2016
The field of biomedicine is reeling from “information overload”. Indeed, biomedical researchers find it almost impossible to stay current with published literature due to the vast amounts of data being generated and published. As a result, they are turning to text mining. Over the past two...
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Single-nucleotide polymorphism discovery in Leptographium longiclavatum, a mountain pine beetle-associated symbiotic fungus, using whole-genome resequencing
Download2014-01-01
Ojeda, Dario I., Dhillon, Braham, Tsui, Clement K. M., Hamelin, Richard C.
Single-nucleotide polymorphisms (SNPs) are rapidly becoming the standard markers in population genomics studies; however, their use in nonmodel organisms is limited due to the lack of cost-effective approaches to uncover genome-wide variation, and the large number of individuals needed in the...
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Supplementary Data and Materials for Daniel Yu's Thesis
2024-07-01
All relevant supplementary data (figures, tables) and materials for Daniel Yu's thesis, completed July 2024.
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The aluminum-in-olivine thermometer for mantle peridotites — Experimental versus empirical calibration and potential applications
Download2017-02-01
E. Jackson, Simon E., Bussweiler, Yannick, Hardman, Matthew, Stern, Richard A., Brey, Gerhard Peter, Kjarsgaard, B.A., Pearson, Graham, Stachel, Thomas
This study provides an experimental calibration of the empirical Al-in-olivine thermometer for mantle peridotites proposed by De Hoog et al. (2010). We report Al concentrations measured by secondary ion mass spectrometry (SIMS) in olivines produced in the original high-pressure, high-temperature,...
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Fall 2015
Researchers conduct association studies to discover biomarkers in order to gain new biological insight on complex diseases and phenotypes. Although most researchers have intuitions about what defines a biomarker and how to assess the results of an association study, there is neither a formal...
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2013
Abou-Moustafa, Karim T., Kozyrskyj, Anita, Guttman, David, Scott, James, Yasui, Yutaka
Entropy measures of probability distributions are widely used measures in ecology, biology, genetics, and in other fields, to quantify species diversity of a community. Unfortunately, entropy–based diversity indices, or diversity indices for short, suffer from three problems. First, when...
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Thermophysical Properties Measurement of Liquid Al and Al-Cu by the Discharge Crucible Method
DownloadFall 2020
The demand to develop Materials Genomics and Integrated Materials Computation requires the availability of high temperature property data of liquid metals. High temperature metallurgical processes, such as refining, casting, welding and additive manufacturing, can be optimized and operate more...
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Tissue-specific gene expression of two class III Arabidopsis peroxidases under aluminum stress
DownloadSpring 2010
Class III peroxidases have been identified as secreted proteins involved in plant defense, auxin metabolism, cell wall modification, and regulation of reactive oxygen species. Transcriptome analysis of Arabidopsis has identified many class III peroxidases that respond to aluminum stress. The...
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Transcriptome and Proteome Based Survey to Identify Aluminum-Responsive Genes in Roots of Arabidopsis Thaliana
DownloadSpring 2010
Aluminum (Al)stress is a major limitation to crop productivity on acidic soils. To help understand the cellular mechanisms underlying the toxicity and resistance of plants to Al, this thesis involved a large-scale, transcriptomic and proteomic analysis of roots of Arabidopsis thaliana and reports...