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Skip to Search Results- 29Graduate and Postdoctoral Studies (GPS), Faculty of
- 29Graduate and Postdoctoral Studies (GPS), Faculty of/Theses and Dissertations
- 18Biological Sciences, Department of
- 18Biological Sciences, Department of/Journal Articles (Biological Sciences)
- 13Chemistry, Department of
- 13Chemistry, Department of/Journal Articles (Chemistry)
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CS23D: A web server for rapid protein structure generation using NMR chemical shifts and sequence data
Download2008
Wishart, D.S., Berjanskii, M., Arndt, D., Lin, G., Tang, P., Zhou, J.
CS23D (chemical shift to 3D structure) is a web server for rapidly generating accurate 3D protein structures using only assigned nuclear magnetic resonance (NMR) chemical shifts and sequence data as input. Unlike conventional NMR methods, CS23D requires no NOE and/or J-coupling data to perform...
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Spring 2014
Benzo[a]pyrene diol epoxide (BPDE), a known carcinogen, is a reactive metabolite of benzo[a]pyrene (BP). BP is usually formed during combustion of organic substances, such as cigarette smoke, automobile emission exhaust, and industrial waste burning. BPDE can covalently bind to the nucleobases of...
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Developing and Assessing an Environmental DNA Protocol for Detecting Amphibian Species in Lentic Systems in Alberta, Canada
DownloadSpring 2016
Global declines of amphibian populations have resulted in increased interest in determining and monitoring the geographic ranges for both endangered and invasive amphibian species. Monitoring programs rely on detection techniques to amass data, techniques that must be dependable in order to...
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DNA-assisted Heterogeneous Integration of Micro- and Nanoelectronic Devices: Modeling, Control, and Rational Design of Selective Attachment
DownloadSpring 2018
Heterogeneous integration is an electronic packaging approach that enables the fabrication and assembly of complete electronic subsystems from components fabricated with different substrates and processes. Current commercial techniques like robotic pick-and-place, fluidic self-assembly, and...
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2006
Berlyn, M.K., Plunkett, G., Wishart, D.S., Nori, H., Riley, M., Rudd, K.E., Glasner, J.D., Arnaud, M.B., Abe, T., Thomson, N.R., Wanner, B.L., Pernas, N.T., Blattner, F.R., Serres, M.H., Thomas, G.H., Horiuchi, T., Kosuge, T., Keseler, I.M., Chaudhuri, R.R.
The goal of this group project has been to coordinate and bring up-to-date information on all genes of Escherichia coli K-12. Annotation of the genome of an organism entails identification of genes, the boundaries of genes in terms of precise start and end sites, and description of the gene...
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Spring 2012
Homogenous Charge Compression Ignition (HCCI) is a promising technology that offers high fuel economy and low oxides of nitrogen and particulate emission for automotive and stationary engines. A significant challenge with HCCI is the large number of partial burn/misfire cycles within the lean...
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Factors affecting the detectability and eastern distribution of grizzly bears in Alberta, Canada
DownloadFall 2013
Effective and adaptive conservation of a species requires knowledge of trend in abundance and distribution. Monitoring species that are highly mobile, cryptic, and occurring at low densities is especially challenging. This research investigates the local factors affecting the detectability of...
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Fall 2016
Humans are the major cause of forest fires in the spring in Alberta, and have resulted in major property damage in both the Flat Top Complex fires in 2011 and the Fort McMurray fire in 2016. Fire occurrence prediction (FOP) models can help predict when and where fires can be expected in order to...
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Gene structure of the goldfish agouti-signaling protein: A putative role in the dorsal-ventral pigment pattern of fish
Download2005
Schioth, H.B., Haitina, T., Cerdá-Reverter, J.M., Peter, R.E.
One of the most successful chromatic adaptations in vertebrates is the dorsal-ventral pigment pattern in which the dorsal skin is darkly colored, whereas the ventrum is light. In fish, the latter pattern is achieved because a melanization inhibition factor inhibits melanoblast differentiation and...
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2009
Bassett, E., Wishart, D.S., Lu, P., MacDonnell, C., Berjanskii, M., Zhou, J., Liang, J., Zhou, Y., Cruz, J.A., Lin, G., Tang, P.
GeNMR (GEnerate NMR structures) is a web server for rapidly generating accurate 3D protein structures using sequence data, NOE-based distance restraints and/or NMR chemical shifts as input. GeNMR accepts distance restraints in XPLOR or CYANA format as well as chemical shift files in either SHIFTY...