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Skip to Search Results- 25Graduate and Postdoctoral Studies (GPS), Faculty of
- 25Graduate and Postdoctoral Studies (GPS), Faculty of/Theses and Dissertations
- 19Biological Sciences, Department of
- 18Biological Sciences, Department of/Journal Articles (Biological Sciences)
- 12Agricultural, Food and Nutritional Science, Department of
- 12Agricultural, Food and Nutritional Science, Department of/Journal Articles (Agricultural, Food and Nutritional Science)
- 10Department of Agricultural, Food, and Nutritional Science
- 4Department of Biological Sciences
- 2Department of Computing Science
- 2Medical Sciences-Laboratory Medicine and Pathology
- 1Department of Cell Biology
- 1Department of Electrical and Computer Engineering
- 2Damaraju, Sambasivarao (Laboratory Medicine and Pathology)
- 1Baracos, Vickie (Oncology)
- 1Belosevic, Miodrag (Biological Sciences)
- 1Dinu, Irina (Department of Public Health Sciences)
- 1Dixon, Walter (Agricultural, Food, and Nutritional Science)
- 1Doug Wiens (Mathematical and Statistical Sciences)
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Public Health Risk Assessment: Validation of risk assessment matrix limitations and an analytical approach to gene set reduction for continuous phenotype in microarray studies
DownloadSpring 2016
Although risk is a core element of public health practice, its definition varies greatly among various public health programs. Several methods have been developed for risk assessment and management in different contexts of public health to better understand disease progression and outcome...
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Quantification of bacteriocin gene expression in Carnobacterium maltaromaticum ATCC PTA-5313
DownloadFall 2014
Carnobacterium maltaromaticum ATCC PTA-5313, which produces bacteriocins carnocyclin A, piscicolin 126 and carnobacteriocin BM1, has been approved for use on meat products to control the growth of Listeria monocytogenes. This combination of bacteriocins is very effective as a biopreservative. It...
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ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun
Download2005
Ye, C., Wang, J., Li, S., Li, R., Wong, G.K.S., Ye, J., Yang, H., Han, Y., Yu, J.
We describe an algorithm, ReAS, to recover ancestral sequences for transposable elements (TEs) from the unassembled reads of a whole genome shotgun. The main assumptions are that these TEs must exist at high copy numbers across the genome and must not be so old that they are no longer...
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2014
Plastow, G., Stothard, P., Moore, S., Bao, H., Meng, Y., Liao, X.
Gene duplication is a widespread phenomenon in genome evolution, and it has been proposed to serve as an engine of evolutionary innovation. In the present study, we performed the first comprehensive analysis of duplicate genes in the bovine genome. A total of 3131 putative duplicated gene pairs...
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Spatiotemporal integration of molecular and anatomical data in virtual reality using semantic mapping
Download2009
Janzen, R.P., Dong, X., Gordon, P.M., Soh, J., Wishart, D.S., Sabhaney, A., Turinsky, A.L., Sensen, C.W., Chang, J., Hau, D., Xia, J., Trinh, Q.M.
We have developed a computational framework for spatiotemporal integration of molecular and anatomical datasets in a virtual reality environment. Using two case studies involving gene expression data and pharmacokinetic data, respectively, we demonstrate how existing knowledge bases for molecular...
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Spring 2017
Survival prediction is becoming a crucial part of treatment planning for most terminally ill patients. Many believe that genomic data will enable us to better estimate survival of these patients, which will lead to better, more personalized treatment options and patient care. As standard...
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T cell-mediated inflammation is stereotyped: mouse delayed-type hypersensitivity reaction and mouse T cell-mediated rejection of renal allografts share common molecular mechanismsT cell-mediated inflammation is stereotyped
DownloadFall 2011
Genome-wide gene expression analysis of diseases has revealed large-scale changes in the expression of thousands of genes (transcripts) representing biological processes. The processes that occur during T cell-mediated rejection (TCMR) of renal allografts in mice and humans have been previously...
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The biology and characterization of NOD-like receptors in goldfish (Carassius auratus L.) macrophages exposed to bacterial pathogens
DownloadSpring 2017
The recognition of pathogen-associated molecular patterns (PAMPs) by pattern recognition receptors (PRRs) is important for the initiation of the host defense against pathogens. NOD-like receptors (NLRs) are a family of PRRs that primarily detect the cytosolic PAMPs of the pathogens. The NLRs have...
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The construction and use of bacterial DNA microarrays based on an optimized two-stage PCR strategy
Download2003
Li, H., Klahn, J., Galbraith, D.W., Deyholos, M., Sherman, L.A., Impson, L., Postier, B.L., Risinger, G., Andrews, H.L., Burnap, R.L., Pesta, D., Wang, H.L., Singh, A.
Background: DNA microarrays are a powerful tool with important applications such as global gene expression profiling. Construction of bacterial DNA microarrays from genomic sequence data using a two-stage PCR amplification approach for the production of arrayed DNA is attractive because it...
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The effects of intermittent suckling protocols on reproductive performance in primiparous sows
DownloadFall 2017
In pig production, sow reproductive efficiency is a key contributor to breeding herd productivity. A major challenge in the implementation of alternative sow housing and piglet management systems is the maintenance of production efficiency. Conventionally, sows are only bred once they come into...