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- 1Biochemistry, Department of
- 1Biochemistry, Department of/Journal Articles (Biochemistry)
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A first generation whole genome RH map of the river buffalo with comparison to domestic cattle
Download2008
Santana, Andre M., Tonhati, Humberto, Greco, Anthony J., Mishra, Bina, Cai, Zhipeng, Kumar, S. T. Bharani, Tantia, Madhu S., Jones, Brittany C., Saradhi, G. Pardha, Miziara, Melissa N., Kumar, M. Aravind, Kochan, Kelli J., Goldammer, Tom, Brunner, Ronald M., Caetano, Alexandre R., Weikard, Rosemarie, Womack, James E., Mathew, Boby, Kumar, Satish, Pelai, Vanderlei A., Filho, Edson A. R., Jeong, Jooha, Prasad, Aparna, Vijh, Ramesh K., Lin, Guohui, Moore, Stephen, Galvao, Stephan R., Mariani, Paola, Grant, Jason R., Stafuzza, Nedenia B., Fornitano, Larissa C., Riggs, Penny K., Stothard, Paul, Amaral, M. Elisabete
Background The recently constructed river buffalo whole-genome radiation hybrid panel (BBURH5000) has already been used to generate preliminary radiation hybrid (RH) maps for several chromosomes, and buffalo-bovine comparative chromosome maps have been constructed. Here, we present the...
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2015-10-27
Jayaraman, Dhileepkumar , Zhang, Yong , Radhakrishnan, Guru V , Sederoff, Heike Winter , Malbreil, Mathilde , Sekimoto, Hiroyuki , Surek, Barbara , Delaux, Pierre-Marc, Ané, Jean-Michel , Roux, Christophe , Sussman, Michael R , Dunand, Christophe , Rothfels, Carl J , Oldroyd, Giles ED , Cheema, Jitender , Wong, Gane Ka-Shu , Stevenson, Dennis W , Melkonian, Michael , Pokorny, Lisa , Morris, Richard J , Nishiyama, Tomoaki , Volkening, Jeremy D
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2011
Willing, Benjamin P., Finlay, B. Brett , Thanachayanont, Teerawat, Croxen, Matthew, Vacharaksa, Anjalee
Host resistance to bacterial infections is thought to be dictated by host genetic factors. Infections by the natural murine enteric pathogen Citrobacter rodentium (used as a model of human enteropathogenic and enterohaemorrhagic E. coli infections) vary between mice strains, from mild...
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Bacillus thuringiensis isolates from the Philippines: habitat distribution, delta-endotoxin diversity, and toxicity to rice stem borers (Lepidoptera: Pyralidae)
Download1998
Cohen, M. B., Aguda, R. M., Bottrell, D. G., Gould, F. L., Litsinger, J. A., Theunis, W., Peferoen, M., Cruz, W. T., Decock, C., Lambert, B.
Abstract: Bacillus thuringiensis Berliner isolates were detected in 57% of 801 samples of rice grain dust, soil, rice field arthropods, and miscellaneous habitats (rice straw compost and mammal faeces) collected at 100 sites in the Philippines. The collection yielded 3950 isolates of B....
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2009
Grant, Jason, Stothard, Paul, Moore, Stephen S., Guan, Leluo, Jin, Weiwu
Background MicroRNAs (miRNAs) are a family of ~22 nucleotide small RNA molecules which regulate gene expression by fully or partially binding to their complementary sequences in mRNAs or promoters. A large number of miRNAs and their expression patterns have been reported in human, mouse and rat....
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2000
Pfeffer, B. A., Chader, G. J., Zakeri, Z. F., Wu, S. P., Bernstein, S. L., Wong, P., Chambers, M. L.
Purpose: The clusterin gene encodes a multi-functional protein that has been identified in different tissues, including a number of different eye tissues, primarily in the mouse and to a much lesser extent in humans. Clusterin has been implicated in a number of cellular processes such as lipid...
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Computational identification of residues that modulate voltage sensitivity of voltage-gated potassium channels
Download2005
Background: Studies of the structure-function relationship in proteins for which no 3D structure is available are often based on inspection of multiple sequence alignments. Many functionally important residues of proteins can be identified because they are conserved during evolution. However,...
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2022-06-01
Samadi, Zahra, Mehdizadeh-Allaf, Malihe, Saifi, Reza, De Groot, Christopher T., Peerhossaini, Hassan
Mixing displays a major role in the growth of photosynthesis microorganisms in active suspensions: it gives access to nutrients, improves the microorganisms’ exposure to light, and homogenizes temperature distribution in photobioreactors (PBRs). Therefore, mixing is an essential factor in the...
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Endogenous melanocortin antagonist in fish: Structure, brain mapping and regulation by fasting of the goldfish agouti-related protein gene
Download2003
Cerdá-Reverter, J.M., Peter, R.E.
Agouti-related protein (AGRP) is a naturally occurring antagonist of melanocortin. In mammals, central AGRP expression is restricted to the arcuate nucleus in which it plays a key role in the control of energy balance by antagonizing melanocortin effects at melanocortin 4 receptors. In goldfish,...
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Generation of a restriction minus enteropathogenic Escherichia coli E2348/69 strain that is efficiently transformed with large, low copy plasmids
Download2008
Raivio, T.L., Price, N.L., Ward, J.D., Hobson, N.
Background Many microbes possess restriction-modification systems that protect them from parasitic DNA molecules. Unfortunately, the presence of a restriction-modification system in a given microbe also hampers genetic analysis. Although plasmids can be successfully conjugated into the...