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- 3Roy Berg Kinsella Research Ranch/Journal Articles (Kinsella Ranch)
- 2Graduate and Postdoctoral Studies (GPS), Faculty of
- 2Graduate and Postdoctoral Studies (GPS), Faculty of /Theses and Dissertations
- 1Agricultural, Food and Nutritional Science, Department of
- 1Agricultural, Food and Nutritional Science, Department of/Journal Articles (Agricultural, Food and Nutritional Science)
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2003
Day, Andy E., Andersson, Leif, Plastow, Graham S., Pielberg, Gerli
Gene duplications are common in the vertebrate genome, and duplicated loci often show a variation in copy number that may have important phenotypic effects. Here we describe a powerful method for quantification of duplicated copies based on pyrosequencing. A reliable quantification was obtained...
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Analysis of Evolutionary Optimization Algorithms in Automated Test Pattern Generation for Sequential Circuits
DownloadSpring 2017
In automated test pattern generation (ATPG), test patterns are automatically generated and tested against all specific modeled faults, such as stuck-at fault, which is most commonly used in fault modeling. Testing of sequential circuits can be performed exhaustively, randomly or algorithmically....
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Fall 2011
This thesis deals with finding design points for nonlinear regression models with the possibility that the fitted model is incorrect. The information matrix depends on the parameter in nonlinear situations. We have assumed a range of values of the parameter and have specified a prior on the...
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Dominant Red Coat Color in Holstein Cattle Is Associated with a Missense Mutation in the Coatomer Protein Complex, Subunit Alpha (COPA) Gene
Download2015
Sällman Almén, M., Liao, X., Stothard, P., Henegar, C., Van Doormaal, B., Rubin, C. -J., Andersson, L., Barsh, G. S., Ito, S., Plastow, G., Wakamatsu, K., Dorshorst, B.
Coat color in Holstein dairy cattle is primarily controlled by the melanocortin 1 receptor (MC1R) gene, a central determinant of black (eumelanin) vs. red/brown pheomelanin synthesis across animal species. The major MC1R alleles in Holsteins are Dominant Black (MC1RD) and Recessive Red (MC1Re). A...
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2012
Wang, Lusheng, Moore, Steve S., Cai, Zhipeng, Goebel, Randy, Lin, Guohui, Wang, Yining, Stothard, Paul
Background Single nucleotide polymorphism (SNP) genotyping assays normally give rise to certain percents of no-calls; the problem becomes severe when the target organisms, such as cattle, do not have a high resolution genomic sequence. Missing SNP genotypes, when related to target traits, would...
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Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds
Download2008
MacEachern, Sean , Wong, Gane K. , Groenen, Martien A., Crooijmans, Richard P., Muir, William M. , Delany, Mary E. , Zhang, Huanmin , Zhang, Yong , Lawley, Cindy T., Albers, Gerard A., Jungerius, Annemieke , Okimoto, Ron , Megens, Hendrik-Jan , Wang, Jun , Vereijken, Addie , Cheng, Hans H.
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2009
Xu, J., Goebel, R. A., Cai, Z., Sabaai, H., Lin, G., Wang, Z., Wang, Y., Stothard, P.
Background The \"common disease – common variant\" hypothesis and genome-wide association studies have achieved numerous successes in the last three years, particularly in genetic mapping in human diseases. Nevertheless, the power of the association study methods are still low, in particular on...