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PROTEUS2: A Web Server for Comprehensive Protein Structure Prediction and Structure-Based Annotation
Download2008
Shrivistava, S., Berjanskii, M., Wishart, D.S., Cruz, J.A., Arndt, D., Montgomerie, S.
PROTEUS2 is a web server designed to support comprehensive protein structure prediction and structure-based annotation. PROTEUS2 accepts either single sequences (for directed studies) or multiple sequences (for whole proteome annotation) and predicts the secondary and, if possible, tertiary...
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Fall 2013
Ortiz Sandoval, Carolina Guadalupe
The ER mitochondria-associated membrane (MAM) is a hub for many calcium-mediated processes required for cell survival, including apoptosis, autophagy, and ATP production. In this thesis, we identified and characterized the interaction between MAM-enriched Rab32 and its effector Drp1, a master...
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ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun
Download2005
Ye, C., Wang, J., Li, S., Li, R., Wong, G.K.S., Ye, J., Yang, H., Han, Y., Yu, J.
We describe an algorithm, ReAS, to recover ancestral sequences for transposable elements (TEs) from the unassembled reads of a whole genome shotgun. The main assumptions are that these TEs must exist at high copy numbers across the genome and must not be so old that they are no longer...
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Respiration, Acid/Base, Ammonia and Ionoregulatory Strategies in the Pacific hagfish (Eptatretus stoutii)
DownloadFall 2016
Hagfish feed on putrefied carrion, which poses several environmental challenges to the scavenger including hypoxia (Low PO2), hypercapnia (high PCO2) and high environmental ammonia (HEA). To any other organism, these conditions would be physiologically challenging; however, hagfish seem to have...
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Roger Saylor and Michel Ferrari (eds): Epistemology and Science Education: Understanding the Evolution vsntelligent Design Controversy
Download2012
Introduction: For decades the creationist movement has threatened the teaching of evolution in the United States, even in public schools. Similar worrisome trends have started in other Western countries. Beyond the major importance of reacting to attempts to undermine the proper teaching of...
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2021-01-01
Shegelski, Victor A., Campbell, Erin O., Thompson, Kirsten M., Whitehouse, Caroline M., Sperling, Felix A. H.
The mountain pine beetle (Dendroctonus ponderosae Hopkins) (Coleoptera: Curculionidae) is a significant destructive force in the pine forests of western Canada and has the capacity to spread east into a novel host tree species, jack pine (Pinaceae). New populations have been documented in central...
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2016-10-11
SSHRC Awarded IG 2017: A landscape archaeological approach to studying early human occupation of the Iringa Region, Tanzania. Previous research in Iringa has revealed occupations from the critical period for the evolution of our species. This project's goal is to explain the data from the site...
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Fall 2020
Dromaeosaurids were small to medium sized theropod dinosaurs that diversified during the Late Cretaceous, reaching a near cosmopolitan distribution. They were diverse in morphology from the small four-winged gliders of Microraptorinae, to the bear-sized giant ‘raptors’ like Achillobator or...
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The Evolutionary Ecology of Parasitic Strategies: Experimental Evolution with a Facultatively Ectoparasitic Mite
DownloadSpring 2019
Although parasitism is a ubiquitous lifestyle, little empirical evidence exists for how and why parasitism evolves from free-living lineages. Analysis of phylogenetic relationships among taxa that exhibit a range of lifestyles has aided in the development of a commonly proposed hypothesis for the...