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A high resolution radiation hybrid map of bovine chromosome 14 identifies scaffold rearrangement in the latest bovine assembly
Download2007
Stothard, P., Wang, Z., de Givry, S., Marques, E., Moore, S. S., Womack, J., Murdoch, B.
Background Radiation hybrid (RH) maps are considered to be a tool of choice for fine mapping closely linked loci, considering that the resolution of linkage maps is determined by the number of informative meiosis and recombination events which may require very large mapping populations....
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Expansion of ruminant-specific microRNAs shapes target gene expression divergence between ruminant and non-ruminant species
Download2013
Kommadath, A., Bao, H., Meng, Y., Plastow, G. S., Stothard, P., Sun, X., Arantes, A. S., Guan, L. L.
Background Understanding how species-specific microRNAs (miRNAs) contribute to species-specific phenotypes is a central topic in biology. This study aimed to elucidate the role of ruminant-specific miRNAs in shaping mRNA expression divergence between ruminant and non-ruminant species. ...
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2008
Kolbehdari, D., Stothard, P., Schnabel, R., Wang, Z., Marques, E., Taylor, J. F., Moore, S. S.
Background Linkage disequilibrium (LD) maps can provide a wealth of information on specific marker-phenotype relationships, especially in areas of the genome where positional candidate genes with similar functions are located. A recently published high resolution radiation hybrid map of bovine...
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High resolution radiation hybrid maps of bovine chromosome 19 and 29 and comparison with the bovine genome sequence assembly
Download2007
Murdoch, B., Wang, Z., Stothard, P., Womack, J. E., Mckay, S. D., Moore, S. S., Schiex, T., Prasad, A.
Background High resolution radiation hybrid (RH) maps can facilitate genome sequence assembly by correctly ordering genes and genetic markers along chromosomes. The objective of the present study was to generate high resolution RH maps of bovine chromosomes 19 (BTA19) and 29 (BTA29), and...
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2007
Seligmann, B., Deyholos, M., Kris, R. M., Felder, S., Botros, I., Galbraith, D. W., Martel, R., Hinton, J., Lambert, G. M.
High-throughput gene expression analysis of genes expressed during salt stress was performed using a novel multiplexed quantitative nuclease protection assay that involves customized DNA microarrays printed within the individual wells of 96-well plates. The levels of expression of the transcripts...
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Hymenolepis diminuta (Cestoda) induces changes in expression of select genes of Tribolium confusum (Coleoptera)
Download2009
Belosevic, M., Shostak, A. W., Hitchen, S. J.
The flour beetle Tribolium confusum is a common experimental intermediate host for the tapeworm Hymenolepis diminuta, but while many aspects of their host-parasite interactions have been determined to have genetic basis, the genes involved have not been identified. In this paper, we report on the...
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Identification of Hepatotropic Viruses from Plasma Using Deep Sequencing : A Next Generation Diagnostic Tool
Download2013-04-17
Jovel, Juan, Wong, Gane K., Mitchell, Troy , Rahbari, Mandana , Zhang, Yong , Mason, Andrew L., Jordan, Tracy, Law, John , Tian, Zhijian , Song, Deyong , O’keefe, Sandra , Carpenter, Eric, Patterson, Jordan , Wang, Weiwei, Meng, Bo , Wasilenko, Shawn T , Ford, Glenn