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Skip to Search Results- 5Biological Sciences, Department of
- 5Biological Sciences, Department of/Journal Articles (Biological Sciences)
- 4Renewable Resources, Department of
- 4Renewable Resources, Department of/Journal Articles (Renewable Resources)
- 3Helmholtz-Alberta Initiative
- 3Helmholtz-Alberta Initiative/Journal Articles & Research Abstracts (Helmholtz-Alberta Initiative)
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CS23D: A web server for rapid protein structure generation using NMR chemical shifts and sequence data
Download2008
Wishart, D.S., Berjanskii, M., Arndt, D., Lin, G., Tang, P., Zhou, J.
CS23D (chemical shift to 3D structure) is a web server for rapidly generating accurate 3D protein structures using only assigned nuclear magnetic resonance (NMR) chemical shifts and sequence data as input. Unlike conventional NMR methods, CS23D requires no NOE and/or J-coupling data to perform...
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Diurnal and annual exchanges of mass and energy between an aspen-hazelnut forest and the atmosphere: testing the mathematical model ecosys with data from the BOREAS experiment
Download1999
Russell, C., den Hartog, G., Grant, R.F., Berry, J.A., Yang, P.C., Neumann, H.H., Blanken, P.D., Black, T.A., Gower, S.T.
There is much uncertainty about the net carbon (C) exchange of boreal forest ecosystems, although this exchange may be an important part of global C dynamics. To resolve this uncertainty, net C exchange has been measured at several sites in the boreal forest of Canada as part of the Boreal...
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2007
Chang, S. X., Bhatti, J., Choi, W. J.
Abstract: The lowering of the water table resulting from peatland drainage may dramatically alter C and N cycling in peatland ecosystems, which contain one-third of the total terrestrial C. In this study, tree annual ring width and C (delta C-13) and N (delta N-15) isotope ratios in soil and...
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2009
Bassett, E., Wishart, D.S., Lu, P., MacDonnell, C., Berjanskii, M., Zhou, J., Liang, J., Zhou, Y., Cruz, J.A., Lin, G., Tang, P.
GeNMR (GEnerate NMR structures) is a web server for rapidly generating accurate 3D protein structures using sequence data, NOE-based distance restraints and/or NMR chemical shifts as input. GeNMR accepts distance restraints in XPLOR or CYANA format as well as chemical shift files in either SHIFTY...
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2006
Wishart, D.S., Neal, S., Berjanskii, M.V.
Every year between 500 and 1000 peptide and protein structures are determined by NMR and deposited into the Protein Data Bank. However, the process of NMR structure determination continues to be a manually intensive and time-consuming task. One of the most tedious and error-prone aspects of this...
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Residual tree retention ameliorates short-term effects of clear-cutting on some boreal songbirds
Download2001
Hannon, S. J., Norton, M. R., Tittler, R.
Abstract: Retention of residual trees in \"cutblocks,\" logged blocks of forest, has been proposed as a method to conserve songbirds in landscapes fragmented by clear-cut logging. We examined songbird communities in the boreal mixed-wood forest of Alberta, Canada, to investigate the effect on...
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The potential of aspen clonal forestry in Alberta: breeding regions and estimates of genetic gain from selection
Download2012
Brouard, J.S., Hamann, A., Gylander, T., Thomas, B.R.
Background: Aspen naturally grows in large, single-species, even-aged stands that regenerate clonally after fire disturbance. This offers an opportunity for an intensive clonal forestry system that closely emulates the natural life history of the species. In this paper, we assess the potential of...