Spongilla lacustris Trinity transcriptome

• Author(s) / Creator(s)

  • Leys, Sally

• Sponges (Porifera) are among the earliest evolving metazoans. Their filter-feeding body plan based on choanocyte
  chambers organized into a complex aquiferous system is so unique among metazoans that it either reflects an early
  divergence from other animals prior to the evolution of features such as muscles and nerves, or that sponges lost these
  characters. Analyses of the Amphimedon and Oscarella genomes support this view of uniqueness—many key metazoan
  genes are absent in these sponges—but whether this is generally true of other sponges remains unknown.We studied the
  transcriptomes of eight sponge species in four classes (Hexactinellida, Demospongiae, Homoscleromorpha, and Calcarea)
  specifically seeking genes and pathways considered to be involved in animal complexity. For reference, we also sought
  these genes in transcriptomes and genomes of three unicellular opisthokonts, two sponges (A. queenslandica and O.
  carmela), and two bilaterian taxa. Our analyses showed that all sponge classes share an unexpectedly large complement of
  genes with other metazoans. Interestingly, hexactinellid, calcareous, and homoscleromorph sponges share more genes
  with bilaterians than with nonbilaterian metazoans. We were surprised to find representatives ofmostmolecules involved
  in cell–cell communication, signaling, complex epithelia, immune recognition, and germ-lineage/sex, with only a few, but
  potentially key, absences. A noteworthy finding was that some important genes were absent from all demosponges
  (transcriptomes and the Amphimedon genome), which might reflect divergence from main-stem lineages including
  hexactinellids, calcareous sponges, and homoscleromorphs. Our results suggest that genetic complexity arose early in
  evolution as shown by the presence of these genes in most of the animal lineages, which suggests sponges either possess
  cryptic physiological and morphological complexity and/or have lost ancestral cell types or physiological processes.

• Date created

  2014-02-27

• Subjects / Keywords

  • Porifera transcriptome
  • Freshwater sponge
  • Spongilla lacustris

• Type of Item

  Dataset

• DOI

  https://doi.org/10.7939/R30R9M73W

• License

  Attribution-NonCommercial-NoDerivatives 4.0 International