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- 2Agricultural, Food and Nutritional Science, Department of/Journal Articles (Agricultural, Food and Nutritional Science)
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CS23D: A web server for rapid protein structure generation using NMR chemical shifts and sequence data
Download2008
Wishart, D.S., Berjanskii, M., Arndt, D., Lin, G., Tang, P., Zhou, J.
CS23D (chemical shift to 3D structure) is a web server for rapidly generating accurate 3D protein structures using only assigned nuclear magnetic resonance (NMR) chemical shifts and sequence data as input. Unlike conventional NMR methods, CS23D requires no NOE and/or J-coupling data to perform...
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Diurnal and annual exchanges of mass and energy between an aspen-hazelnut forest and the atmosphere: testing the mathematical model ecosys with data from the BOREAS experiment
Download1999
Russell, C., den Hartog, G., Grant, R.F., Berry, J.A., Yang, P.C., Neumann, H.H., Blanken, P.D., Black, T.A., Gower, S.T.
There is much uncertainty about the net carbon (C) exchange of boreal forest ecosystems, although this exchange may be an important part of global C dynamics. To resolve this uncertainty, net C exchange has been measured at several sites in the boreal forest of Canada as part of the Boreal...
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2007
Chang, S. X., Bhatti, J., Choi, W. J.
Abstract: The lowering of the water table resulting from peatland drainage may dramatically alter C and N cycling in peatland ecosystems, which contain one-third of the total terrestrial C. In this study, tree annual ring width and C (delta C-13) and N (delta N-15) isotope ratios in soil and...
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Effects of dietary enrichment with a marine oil-based n-3 LCPUFA supplement in sows with predicted birth weight phenotypes on birth litter quality and growth performance to weaning
Download2015
Patterson, Jennifer L., Foxcroft, George R., Dixon, Walter T., Spencer, Joel D., Smit, M. N., Dyck, Michael K.
The effects of a marine oil-based n-3 long-chain polyunsaturated fatty acid (mLCPUFA) supplement fed to the sow from weaning, through the rebreeding period, during gestation and until end of lactation on litter characteristics from birth until weaning were studied in sows with known litter birth...
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Effects of dietary enrichment with a marine oil-based n-3 LCPUFA supplement in sows with predicted birth weight phenotypes on growth performance and carcass quality of offspring
Download2015
Dyck, Michael K., Foxcroft, George R., Patterson, Jennifer L., Dixon, Walter T., Smit, M. N., Spencer, Joel D.
Effects of a marine oil-based n-3 LCPUFA supplement (mLCPUFA) fed from weaning until the end of the next lactation to sows with a predicted low litter birth weight (LBW) phenotype on growth performance and carcass quality of litters born to these sows were studied, based on the hypothesis that...
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2009
Bassett, E., Wishart, D.S., Lu, P., MacDonnell, C., Berjanskii, M., Zhou, J., Liang, J., Zhou, Y., Cruz, J.A., Lin, G., Tang, P.
GeNMR (GEnerate NMR structures) is a web server for rapidly generating accurate 3D protein structures using sequence data, NOE-based distance restraints and/or NMR chemical shifts as input. GeNMR accepts distance restraints in XPLOR or CYANA format as well as chemical shift files in either SHIFTY...
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2006
Wishart, D.S., Neal, S., Berjanskii, M.V.
Every year between 500 and 1000 peptide and protein structures are determined by NMR and deposited into the Protein Data Bank. However, the process of NMR structure determination continues to be a manually intensive and time-consuming task. One of the most tedious and error-prone aspects of this...
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2012
Wasylishen, R. E., Bernard, G. M., Quideau, S. A., Norris, C. E., Landhausser, S. M.
Abstract: Enriching plant tissues with C-13 and N-15 isotopes has provided long-lasting, non-reactive tracers to quantify rates of terrestrial elemental fluxes (e.g., soil organic matter decomposition). However, the molecular location and level of isotope enrichment may differ among plant...