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- 33Biological Sciences, Department of/Journal Articles (Biological Sciences)
- 16Graduate and Postdoctoral Studies (GPS), Faculty of
- 16Graduate and Postdoctoral Studies (GPS), Faculty of/Theses and Dissertations
- 5Agricultural, Food and Nutritional Science, Department of
- 5Agricultural, Food and Nutritional Science, Department of/Journal Articles (Agricultural, Food and Nutritional Science)
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Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection
Download2015
Choi, I., Guan, L., Plastow, G. S., Liu, P., Koltes, J. E., Loyd, H., Boddicker, N. J., Eisley, C. J., Schroyen, M., Bao, H., Dekkers, J. C. M., Kommadath, A., Abrams, S. M., Reecy, J. M., Rowland, R. R. R., Serão, N. V. L., Lunney, J. K., Carpenter, S., Stothard, P., Fritz-Waters, E., Tuggle, C. K.
Background Previously, we identified a major quantitative trait locus (QTL) for host response to Porcine Respiratory and Reproductive Syndrome virus (PRRSV) infection in high linkage disequilibrium (LD) with SNP rs80800372 on Sus scrofa chromosome 4 (SSC4). Results Within this QTL,...
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Improving the accuracy of protein secondary structure prediction using structural alignment
Download2006
Gallin, W.J., Wishart, D.S., Montgomerie, S., Sundararaj, S.
Background: The accuracy of protein secondary structure prediction has steadily improved over the past 30 years. Now many secondary structure prediction methods routinely achieve an accuracy (Q3) of about 75%. We believe this accuracy could be further improved by including structure (as opposed...
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Local Mobile Gene Pools Rapidly Cross Species Boundaries To Create Endemicity within Global Vibrio cholerae Populations
Download2011
Boucher, Y., Tarr, C.L., Cordero, O.X., Takemura, A., Schliep, K., Hunt, D.E., Polz, M.F., Lopez, P., Bapteste, E.
Vibrio cholerae represents both an environmental pathogen and a widely distributed microbial species comprised of closely related strains occurring in the tropical to temperate coastal ocean across the globe (Colwell RR, Science 274:2025–2031, 1996; Griffith DC, Kelly-Hope LA, Miller MA, Am. J....
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Microstructural Changes in Noncoding Chloroplast DNA: Interpretation, Evolution, and Utility of Indels and Inversions in Basal Angiosperm Phylogenetic Inference
Download2000
Olmstead, R.G., Burns, A.C.E., Graham, S.W., Reeves, P.A.
Microstructural changes in several very slowly evolving chloroplast introns and intergenic spacers were characterized across a broad range of angiosperms, including most of the major basal lineages. Insertion/ deletion events (indels) in the surveyed noncoding regions of the large inverted repeat...
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2007
Sperling, F. A. H., MacQuarrie, C. J. K., Langor, D. W.
Mitochondrial cytochrome oxidase I and 11 genes were sequenced for two invasive alien birch (Betula L. [Betulaceae]) leaf-mining sawflies, Profenusa thomsoni (Konow, 1886) (Hymenoptera: Tenthredinidae) and Scolioneura betuleti (King, 1816) (Hymenoptera: Tenthredinidae), accidentally introduced...
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Fall 2014
With well over 3,400 described species, snakes undoubtedly represent one of the most successful groups of reptiles. Much has been written about their ecology, behavior, anatomy, relationships and evolution. However, despite the debate about the origin of this taxonomic group dating back to the...
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Fall 2018
A full understanding of the evolution of novel forms requires inference about their origins through the study of variation in extant taxa and clues from the fossil record. However, the origins of morphological diversity in many groups are obscured by the scarcity of transitional fossils or...