ERA

Download the full-sized PDF of Tumor invasion margin from diffusion weighted imagingDownload the full-sized PDF

Analytics

Share

Permanent link (DOI): https://doi.org/10.7939/R3Q13V

Download

Export to: EndNote  |  Zotero  |  Mendeley

Communities

This file is in the following communities:

Graduate Studies and Research, Faculty of

Collections

This file is in the following collections:

Theses and Dissertations

Tumor invasion margin from diffusion weighted imaging Open Access

Descriptions

Other title
Subject/Keyword
tumor invasion margin
Type of item
Thesis
Degree grantor
University of Alberta
Author or creator
Mosayebi, Parisa
Supervisor and department
Dana Cobzas, Computing Science
Martin Jagersand, Computing Science
Examining committee member and department
Thomas Hillen, Mathematical and Statistical Sciences
Russell Greiner, Computing Science
Department
Department of Computing Science
Specialization

Date accepted
2010-01-28T21:31:18Z
Graduation date
2010-06
Degree
Master of Science
Degree level
Master's
Abstract
Glioma is one of the most challenging types of brain tumors to be treated or controlled locally. One of the main problems is to determine which areas of the apparently normal brain contain glioma cells, as gliomas are known to infiltrate several centimetres beyond the clinically apparent lesion that is visualized on standard CT or MRI. To ensure that radiation treatment encompasses the whole tumor, including the cancerous cells not revealed by MRI, doctors treat the volume of brain that extends 2cm out from the margin of the visible tumor. This approach does not consider varying tumor-growth dynamics in different brain tissues, thus it may result in killing some healthy cells while leaving cancerous cells alive in other areas. These cells may cause recurrence of the tumor later in time which limits the effectiveness of the therapy. In this thesis, we propose two models to define the tumor invasion margin based on the fact that glioma cells preferentially spread along nerve fibers. The first model is an anisotropic reaction-diffusion type tumor growth model that prioritizes diffusion along nerve fibers, as given by DW-MRI data. The second proposed approach computes the tumor invasion margin using a geodesic distance defined on the Riemannian manifold of brain fibers. Both mathematical models result in Partial Differential Equations (PDEs) that have to be numerically solved. Numerical methods used for solving differential equations should be chosen with great care. A part of this thesis is dedicated to discuss in detail, the numerical aspects such as stability and consistency of different finite difference methods used to solve these PDEs. We review the stability issues of several 2D methods that discretize the anisotropic diffusion equation and we propose an extension of one 2D stable method to 3D. We also analyze the stability issues of the geodesic model. In comparison, the geodesic model is numerically more stable than the anisotropic diffusion model since it results in a first-order PDE. Finally, we evaluate both models on actual DTI data from patients with glioma by comparing our predicted growth with follow-up MRI scans. Results show improvement in predicting the invasion margin when using the geodesic distance model as opposed to the 2cm conventional Euclidean distance.
Language
English
DOI
doi:10.7939/R3Q13V
Rights
License granted by Parisa Mosayebi (mosayebi@ualberta.ca) on 2010-01-28T17:20:34Z (GMT): Permission is hereby granted to the University of Alberta Libraries to reproduce single copies of this thesis and to lend or sell such copies for private, scholarly or scientific research purposes only. Where the thesis is converted to, or otherwise made available in digital form, the University of Alberta will advise potential users of the thesis of the above terms. The author reserves all other publication and other rights in association with the copyright in the thesis, and except as herein provided, neither the thesis nor any substantial portion thereof may be printed or otherwise reproduced in any material form whatsoever without the author's prior written permission.
Citation for previous publication

File Details

Date Uploaded
Date Modified
2014-04-30T23:31:23.637+00:00
Audit Status
Audits have not yet been run on this file.
Characterization
File format: pdf (Portable Document Format)
Mime type: application/pdf
File size: 2524386
Last modified: 2015:10:12 14:43:21-06:00
Filename: parisa_template.pdf
Original checksum: c4babbe273b5931d4c6ee4c140d352eb
Well formed: true
Valid: true
Page count: 94
Activity of users you follow
User Activity Date