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BGI-RIS: An integrated information resource and comparative analysis workbench for rice genomics
Download2004
Wang, J., Chen, Y., Zhao, H., Dai, M., Zhao, W., Huang, X., Zhang, Y., Ren. X., Jiao, Y., Wong, G., Wei, S., Ni, P., Yu, J., Zhang, J., Li, S., Yang, H., Fu, J., He, X.
Rice is a major food staple for the world's population and serves as a model species in cereal genome research. The Beijing Genomics Institute (BGI) has long been devoting itself to sequencing, information analysis and biological research of the rice and other crop genomes. In order to facilitate...
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ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun
Download2005
Ye, C., Wang, J., Li, S., Li, R., Wong, G.K.S., Ye, J., Yang, H., Han, Y., Yu, J.
We describe an algorithm, ReAS, to recover ancestral sequences for transposable elements (TEs) from the unassembled reads of a whole genome shotgun. The main assumptions are that these TEs must exist at high copy numbers across the genome and must not be so old that they are no longer...
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2005-09-01
Zhang, Xiuqing , Bolund, Lars , Bao, Jingyue , Ma, Ligeng , Wong, Gane K., Deng, Xing Wang , Wang, Jian , Liu, Xigang , Yuan, Longping , Li, Jian , Zhao, Hongyu , Pedersen, Soren , Wang, Xiangfeng , Wang, Jun , Sun, Ning , Cao, Mengliang , Chen, Chen , Jiao, Yuling , Li, Lin , Su, Ning
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Construction of bovine whole-genome radiation hybrid and linkage maps using high-throughput genotyping
Download2007
Williams, J. L., Moore, S. S., Wang, Z., McKay, S. D., Murdoch, B. M.
High-density whole-genome maps are essential for ordering genes or markers and aid in the assembly of genome sequence. To increase the density of markers on the bovine radiation hybrid map, and hence contribute to the assembly of the bovine genome sequence, an Illumina® BeadStation was used to...
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Fall 2011
Recent shifts towards spatial issues within education are examined, and mapping is identified as particularly important. The multidisciplinary trend of complexity science is surveyed, in turn, through the lens of physics and education research. The provincial education system of Alberta is...
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Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes
Download2012-11-21
Zhang, Yong , Wu, Xiaolei , Patterson, Jordan , Villarreal, Juan C. , Jordon-Thaden, Ingrid , Bruskiewich, Richard , Sage, Rowan F. , Goh, Falicia , Wong, Gane K., Chase, Mark W. , Stewart Jr, C Neal , Clarke, Neil D. , Burris, Jason N. , Ralph, Paula , Tian, Zhijian , Myburg, Henrietta , Surek, Barbara. , Rolf, Megan. , Graham, Sean , Thomsen, Christina J. , Johnson, Marc TJ. , Miles, Nicholas , Carrigan, Charlotte T. , Greiner, Stephan , Soltis, Pamela , Leebens-Mack, James , Edger, Patrick P. , Soltis, Douglas , Kutchan, Toni M. , Melkonian, Michael , Covshoff, Sarah , Carpenter, Eric J., Deyholos, Michael K. , Pires, J Chris , Hibberd, Julian M. , Stevenson, Dennis
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Horizontal transfer of genes and genomes in an endosymbiotic system: Investigation of the movement of intracellular bacteria and related gene transfer
DownloadFall 2013
The genus Wolbachia is comprised of intracellular gram negative bacteria capable of infecting a wide range of insect hosts. In arthropods, Wolbachia are reproductive parasites that can cause cytoplasmic incompatibility, parthenogenesis, feminization or male killing, each of which enhances the...
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Insights into temperature adaptation in the Thermotogae gained through transcriptomics and comparative genomics
DownloadFall 2014
Thermophilic microbes are extremophiles that live at high temperatures. In order to survive and maintain function of their biological molecules, they have a suite of characteristics not found in organisms that grow at moderate temperatures (mesophiles) that range from the cellular to the protein...
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Insights into temperature adaptation in the Thermotogae gained through transcriptomics and comparative genomics - Appendices
Insights into temperature adaptation in the Thermotogae gained through transcriptomics and comparative genomics - Appendices
Download2014
These are appendices C - G for the University of Alberta M.Sc. thesis: Pollo, Stephen M. J. 2014. Insights into temperature adaptation in the Thermotogae gained through transcriptomics and comparative genomics
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Fall 2016
March 11, 2011, 14:46 Japan Standard Time. This was the moment that marked the beginning of what is now known as the “2011 Tōhoku earthquake and tsunami,” a catastrophe that brought about devastation throughout many regions in Japan, most notably in the north eastern region of the main island of...