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- 20Interactions
- 12Affinity
- 8Metabolomics
- 7Electrospray ionization mass spectrometry
- 6Proteins
- 55Graduate and Postdoctoral Studies (GPS), Faculty of
- 55Graduate and Postdoctoral Studies (GPS), Faculty of/Theses and Dissertations
- 17Chemistry, Department of
- 17Chemistry, Department of/Journal Articles (Chemistry)
- 3Biological Sciences, Department of
- 3Biological Sciences, Department of/Journal Articles (Biological Sciences)
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2014-10-27
Wu, Xiaolei , Wafula, Eric , Yan, Zhixiang , Kutchan, Toni M. , Gitzendanner, Matthew A, Shaw, Jonathan A., Chen, Tao. , Wickett, Norman J., Nguyen, Nam , Burleigh, J Gordon , Miles, Nicholas W. , Soltis, Pamela S. , Melkonian, Michael , Deyholos, Michael K. , Matasci, Naim , DeGironimo, Lisa , Samudrala, Ram , Leebens-Mack, Jim , Mirarab, Siavash , Barker, Michael , Sun, Xiao , Soltis, Douglas E. , Rolf, Megan , Tian, Zhijian , Wong, Gane K, Rothfels, Carl , Pokorny, Lisa , Zhang, Yong , Ayyampalayam, Saravanaraj , Graham, Sean W. , Roure, Béatrice, Der, Joshua P., Wang, Jun , Mathews, Sarah , Surek, Barbara , Baucom, Regina S. , Ruhfel, Brad R. , Villarreal, Juan C., Stevenson, Dennis W. , Hung, Ling-Hong , Warnow, Tandy , Philippe, Hervé , Carpenter, Eric J.
The 1,000 plants (1KP) project is an international multi-disciplinary consortium that has generated transcriptome data from over 1,000 plant species, with exemplars for all of the major lineages across the Viridiplantae (green plants) clade. Here, we describe how to access the data used in a...
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Design and performance evaluation of vertical shafts: rational shaft design method and verification of design method
Download1988
Ground deformations around axisymmetric shafts cannot be determined with the design approaches currently available, which are mostly based on plasticity methods. The convergence–confinement method (usually applied to tunnels), with consideration of gravitational effects and the three-dimensional...
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2016
Klassen, John S., Han, Ling, Kitova, Elena N.
This study reports on the use of the catch-and-release electrospray ionization mass spectrometry (CaR-ESI-MS) assay, combined with glycomicelles, as a method for detecting specific interactions between water-soluble proteins and glycolipids (GLs) in aqueous solution. The B subunit homopentamers...
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2016
Han, Ling, Klassen, John S., Kitova, Elena N.
This study reports on the use of the catch-and-release electrospray ionization mass spectrometry (CaR-ESI-MS) assay, combined with glycomicelles, as a method for detecting specific interactions between water-soluble proteins and glycolipids (GLs) in aqueous solution. The B subunit homopentamers...
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Development and Analysis of Magnetic Carbon Nanotube and Microbubble-Assisted High Centrifugation Field Techniques For The Increase of Cell Membrane Permeability
DownloadSpring 2014
To cure diseases at the gene level, therapeutic biomaterials need to enter the cells. However, since the cell membrane is a highly selective structure, its permeability is usually very low. In this thesis, we propose two innovative and efficient methods to increase cell membrane permeability....
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Development and Application of Chemical Isotope Labeling Methods for Metabolomics Data Processing and Liquid Chromatography-Mass Spectrometry-Based Metabolomics
DownloadSpring 2016
Metabolomics is the study of chemical processes involving small-molecule metabolites in a given biological system. These small molecules are downstream outputs of cellular activities. An understanding of the metabolome change can help us to visualize perturbations in the genome or proteome from...
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Development and Application of ESI-MS Based Techniques for Quantitative Determination of Protein-Carbohydrate Interactions
DownloadFall 2016
This thesis describes the development and application of mass spectrometry methods to study protein-ligand interactions in vitro. Liquid sample desorption electrospray ionization mass spectrometry (liquid sample DESI-MS) was employed to quantify protein-carbohydrate interactions in aqueous buffer...
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Development and application of mass spectrometry for bioanalysis of proteins and metabolites
DownloadSpring 2011
The proteome, a hybrid term from protein and genome, is the total set of proteins expressed by a genome in a cell, tissue, or organism at a given time. Proteomics, the study of the proteome, is concerned with a variety of topics such as identity, quantity, activity, structure, protein-protein...
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Development and Applications of Mass Spectrometric Methods for Proteome Analysis and Protein Sequence Characterization
DownloadFall 2013
Mass spectrometry (MS) is widely used in proteomic work for protein identification and characterization. A key to the success of MS for protein analysis is related to sample preparation. Current sample preparation methods do not meet all the needs of protein or proteome analysis. My thesis work...